BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037F08SP1|AL430420
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1056 1664 0.0
>3x_Contig1056
Length = 3113
Score = 1664 bits (837), Expect = 0.0
Identities = 870/879 (98%), Gaps = 3/879 (0%)
Strand = Plus / Plus
Query: 1 agccaataaaccaccccttttgctggatttttccattgacactagccatcgtaaaccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2225 agccaataaaccaccccttttgctggatttttccattgacactagccatcgtaaaccttg 2284
Query: 61 tctttggtgctttaataggtttacggttagttcatttggcgtcaaatcttccccttcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2285 tctttggtgctttaataggtttacggttagttcatttggcgtcaaatcttccccttcaac 2344
Query: 121 ttctgtttcgatctctttcaagccttctaataaatctcttaatgacgacgcatcagcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2345 ttctgtttcgatctctttcaagccttctaataaatctcttaatgacgacgcatcagcagt 2404
Query: 181 gttatagatattcgtcatacgtagtgaatggtctattctcgttttataattctctataac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2405 gttatagatattcgtcatacgtagtgaatggtctattctcgttttataattctctataac 2464
Query: 241 ctcatctatgtcatcatcctcatcagagtcgtaagtsacaaactcctcattttttattgt 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2465 ctcatctatgtcatcatcctcatcagagtcgtaagtaacaaactcctcattttttattgt 2524
Query: 301 tttacctccaataactgcmaggtcatcatcattggcatattgctcgggaatagaaaaccc 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2525 tttacctccaataactgcaaggtcatcatcattggcatattgctcgggaatagaaaaccc 2584
Query: 361 cagttggaataggcgatccaaaactcctggtatagtgccaatatataavaagcgatccag 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2585 cagttggaataggcgatccaaaactcctggtatagtgccaatatataaaaagcgatccag 2644
Query: 421 cacatcaatgctcatctgcacggtggaacgccacattgatggtacagtggttgagttgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2645 cacatcaatgctcatctgcacggtggaacgccacattgatggtacagtggttgagttgaa 2704
Query: 481 ctcctctgaaatttttaggaggcttaatatgttcgaaagtgcgctcacgattgtatcttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2705 ctcctctgaaatttttaggaggcttaatatgttcgaaagtgcgctcacgattgtatcttg 2764
Query: 541 agccattttatcgagagagtggtttgttgacaaagttaatattgcctcttctatttcatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2765 agccattttatcgagagagtggtttgttgacaaagttaatattgcctcttctatttcatc 2824
Query: 601 ctgaagctttcgtaaagatagcagttgtgaatggccttcgagtttcgaagtggatttctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2825 ctgaagctttcgtaaagatagcagttgtgaatggccttcgagtttcgaagtggatttctt 2884
Query: 661 cgattcatatggtggatttccaattaaagctttatcatccttttcatatttcaatccgct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2885 cgattcatatggtggatttccaattaaagctttatcatccttttcatatttcaatccgct 2944
Query: 721 tgacaaagagtgacttgtagatgattgagagtctcttgcgttgtcaactagcgcasctgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 2945 tgacaaagagtgacttgtagatgattgagagtctcttgcgttgtcaactagcgcagcctg 3004
Query: 781 gcgctcagcattaagaagacaattcaagtatgtacctttcataatggactggtatgttaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3005 gcgctcagcattaagaagacaattcaagtatgtacctttcataatggactggtatgttaa 3064
Query: 841 ttcgaca-ctcgg-cattttgcagc-cagtcctttggag 876
||||||| ||||| ||||||||||| |||||||||||||
Sbjct: 3065 ttcgacatctcggccattttgcagcncagtcctttggag 3103
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6335
Number of Sequences: 1807
Number of extensions: 6335
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)